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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1216566 chr5:96264056 A/G ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs1216567 chr5:96263839 C/T ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs1216568 chr5:96263646 T/G ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs1216569 chr5:96262534 G/T ERAP2 chr5:96211643-96255420:+ 0.88 8.82 6.62E-12 Box Plot
ACC rs1216570 chr5:96261717 T/C ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs1216571 chr5:96260561 C/T ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs12184323 chr1:213087945 G/A LQK1 chr1:213029947-213031480:- 0.72 5.75 4.72E-7 Box Plot
ACC rs12193777 chr6:86246709 C/A SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs12203963 chr6:86223316 T/C SNHG5 chr6:86370668-86388454:- 0.74 8.39 3.05E-11 Box Plot
ACC rs12206573 chr6:86258614 G/A SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs12235062 chr8:124438015 C/T WDYHV1 chr8:124428965-124479470:+ 0.52 5.37 1.83E-6 Box Plot
ACC rs12296739 chr12:31197575 C/A DDX11 chr12:31226779-31257725:+ 0.74 6.49 3.26E-8 Box Plot
ACC rs12302881 chr12:7642899 A/G ENO2 chr12:7022909-7032861:+ 1.03 5.46 1.34E-6 Box Plot
ACC rs1230358 chr5:96211741 G/T ERAP2 chr5:96211643-96255420:+ 0.78 6.85 8.73E-9 Box Plot
ACC rs1230381 chr5:96254209 A/G ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot